utils_nfschema_plugin
Run nf-schema to validate parameters and create a summary of changed parameters
validationJSON schemapluginparameterssummary
Input
name
description
pattern
The workflow object of the used pipeline.
This object contains meta data used to create the params summary log
Path to the parameters JSON schema.
This has to be the same as the schema given to the validation.parametersSchema config
option. When this input is empty it will automatically use the configured schema or
”${projectDir}/nextflow_schema.json” as default. The schema should not be given in this way
for meta pipelines.
included in
abotyperairrflowampliseqbacassbamtofastqcellpaintingcircrnacoproidcreatepanelrefscreatetaxdbcrisprseqdatasyncdeepmodeloptimdemodemultiplexdenovotranscriptdetaxizerdiseasemodulediscoverydropdrugresponseevalepitopepredictionevexplorerfastqrepairfastquorumfuncscangenomeassemblergenomeqcgwashlatypinglncpipelsmquantmagmagmapmcmicrometapepmetatdenovomethylarraymethylongmethylseqmhcquantmitodetectmolkartmultiplesequencealignnanostringnascentoncoanalyserpacvarpairgenomealignpangenomepanoramaseqpathogensurveillancephaseimputephyloplacepixelatorproteinannotatorproteinfamiliesrangelandrarediseaserarevariantburdenreferencesreporthoribomsqcriboseqrnadnavarrnafusionrnaseqrnavarsammyseqsarekscdownstreamscnanoseqscrnaseqseqinspectorseqsubmitsmrnaseqsopaspatialvispatialxestableexpressiontaxprofilertbanalyzertfactivitytroughgraphvariantbenchmarkingvariantprioritizationviralmetagenomeviralrecon
included modules and subworkflows
maintainer
