DNA contaminant removal using NanoLyse
meta
:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
fastq
:file
Basecalled reads in FASTQ.GZ format
*.fastq.gz
fasta
A reference fasta file against which to filter.
*.fasta
Reads with contaminants removed in FASTQ format
log
*.log
Log of the Nanolyse run.
versions
versions.yml
File containing software versions
