Apply set operations to VCF files
meta
:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
vcfs
:list
List containing 2 or more vcf/bcf files. These must be compressed and have an associated index. e.g. [ ‘file1.vcf.gz’, ‘file2.vcf’ ]
tbis
List containing the tbi index files corresponding to the vcf/bcf input files e.g. [ ‘file1.vcf.tbi’, ‘file2.vcf.tbi’ ]
results
${prefix}
:directory
Folder containing the set operations results perform on the vcf files
versions
versions.yml
:file
File containing software versions
Computes intersections, unions and complements of VCF files.
