Compresses VCF files
meta
:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
vcf
:file
VCF file
*.{vcf}
tbi
tabix index file
*.{tbi}
fasta
FASTA reference file
*.{fasta,fa}
mask
BED file used for masking
*.{bed}
*.fa
FASTA reference consensus file
versions
versions.yml
File containing software versions
Create consensus sequence by applying VCF variants to a reference fasta file.
