Read CEL files into an ExpressionSet and generate a matrix
meta
:map
Groovy Map containing sample information e.g. [ id:‘test’ ]
samplesheet
:file
CSV or TSV format sample sheet with sample metadata and CEL file names
celfiles_dir
:list
Path to a directory containing CEL files
*.{CEL,CEL.gz}
meta2
description
Optional description file in MIAME format
rds
*.rds
Serialised ExpressionSet object
expression
*matrix.tsv
TSV-format intensity matrix
matrix.tsv
annotation
*.annotation.tsv
TSV-format annotation table
versions
versions.yml
File containing software versions
Methods for Affymetrix Oligonucleotide Arrays
